Transcript: lnc-UBLCP1-7:1

Basic information

LNCipedia transcript ID: lnc-UBLCP1-7:1 
LNCipedia gene ID: lnc-UBLCP1-7
Ensembl Gene ID: ENSG00000253811
Ensembl Transcript ID: ENST00000522582
Location (hg38): chr5:158983006-158984789
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 563 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000522582.1; CTD-2363C16.1-001; OTTHUMT00000373931.1; NONHSAT104808
Alternative gene names: ENSG00000253811.1; CTD-2363C16.1; OTTHUMG00000163516.1; AC136424.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -54.5735 non-coding 
CPAT coding probability 9.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-UBLCP1-7:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-UBLCP1-7:1
4.0 lnc-UBLCP1-7:1
4.1 lnc-UBLCP1-7:1
5.0 lnc-UBLCP1-7:1
5.1 lnc-MRPL22-32:1
5.2 lnc-UBLCP1-7:1