Transcript: lnc-ULBP3-2:1

Basic information

LNCipedia transcript ID: lnc-ULBP3-2:1 
LNCipedia gene ID: lnc-ULBP3-2
Ensembl Gene ID: ENSG00000226599
Ensembl Transcript ID: ENST00000455229
Location (hg38): chr6:150650772-150652025
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 614 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000455229; ENST00000455229.1; RP11-136K14.3-001; OTTHUMT00000042690.1; NONHSAT115545
Alternative gene names: ENSG00000226599; RP11-136K14.3; ENSG00000226599.1; OTTHUMG00000015823.1; AL450344.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -83.427 non-coding 
CPAT coding probability 0.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ULBP3-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ULBP3-2:1
3.1 lnc-ULBP3-2:1
4.0 lnc-ULBP3-2:1
4.1 lnc-ULBP3-2:1
5.0 lnc-ULBP3-2:1
5.1 lnc-ZBTB2-8:1
5.2 lnc-ULBP3-2:1