Transcript: lnc-USP12-6:1

Basic information

LNCipedia transcript ID: lnc-USP12-6:1 
LNCipedia gene ID: lnc-USP12-6
Location (hg38): chr13:27034844-27037174
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2190 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: refGeneNc_837_NR_029383
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -30.7873 non-coding 
CPAT coding probability 4.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-USP12-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-USP12-6:1
4.0 lnc-USP12-6:1
4.1 lnc-USP12-6:1
5.0 lnc-USP12-6:1
5.1 lnc-SLC7A1-27:1
5.2 lnc-USP12-6:1