Transcript: LINC01697:40

Basic information

LNCipedia transcript ID: LINC01697:40 
LNCipedia gene ID: LINC01697
RefSeq ID: NR_126011
Location (hg38): chr21:28090403-28103264
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 888 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_126011; NR_126011.1
Alternative gene names: LOC284825


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -142.7353 non-coding 
CPAT coding probability 0.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01697:40 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-USP16-3:11
4.0 lnc-USP16-3:11
4.1 lnc-USP16-3:11
5.0 lnc-USP16-3:11
5.1 LINC01697:19
5.2 LINC01697:40