Transcript: lnc-WDR45B-4:1

Basic information

LNCipedia transcript ID: lnc-WDR45B-4:1 
LNCipedia gene ID: lnc-WDR45B-4
Location (hg38): chr17:82673997-82676488
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2450 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000574080.1; RP11-388C12.2-001; OTTHUMT00000439020.1; NONHSAT056743
Alternative gene names: ENSG00000262415.1; RP11-388C12.2; OTTHUMG00000177808.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 17.3096 non-coding 
CPAT coding probability 7.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-WDR45B-4:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-WDR45L-3:1
4.0 lnc-WDR45L-3:1
4.1 lnc-WDR45L-3:1
5.0 lnc-WDR45L-3:1
5.1 lnc-CD7-25:1
5.2 lnc-WDR45B-4:1