Transcript: lnc-WDR54-2:1

Basic information

LNCipedia transcript ID: lnc-WDR54-2:1 
LNCipedia gene ID: lnc-WDR54-2
Location (hg38): chr2:74356125-74358573
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2449 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: refGeneNc_682_NR_024606
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -17.5359 non-coding 
CPAT coding probability 74.98% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-WDR54-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-WDR54-2:1
4.0 lnc-WDR54-2:1
4.1 lnc-WDR54-2:1
5.0 lnc-WDR54-2:1
5.1 lnc-POLE4-28:1
5.2 lnc-WDR54-2:1