Transcript: lnc-WFS1-3:16

Basic information

LNCipedia transcript ID: lnc-WFS1-3:16 
LNCipedia gene ID: lnc-WFS1-3
Location (hg38): chr4:6239441-6239937
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 497 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015
Alternative transcript names: NONHSAT094988; ENST00000602577.1
Alternative gene names: ENSG00000269908.1; RP11-1406H17.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -54.9156 non-coding 
CPAT coding probability 3.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-WFS1-3:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-WFS1-5:1
4.0 lnc-WFS1-5:1
4.1 lnc-WFS1-3:16
5.0 lnc-WFS1-3:16
5.1 lnc-GPR78-38:16
5.2 lnc-WFS1-3:16