Transcript: lnc-XPO1-5:1

Basic information

LNCipedia transcript ID: lnc-XPO1-5:1 
LNCipedia gene ID: lnc-XPO1-5
Location (hg38): chr2:61383885-61384275
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 391 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: expReg_chr2_4824_-
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -111.8138 non-coding 
CPAT coding probability 0.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-XPO1-5:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-XPO1-5:1
4.0 lnc-XPO1-5:1
4.1 lnc-XPO1-5:1
5.0 lnc-XPO1-5:1
5.1 lnc-PPP4R3B-87:1
5.2 lnc-XPO1-5:1