Transcript: lnc-ATP23-3:1

Basic information

LNCipedia transcript ID: lnc-ATP23-3:1 
LNCipedia gene ID: lnc-ATP23-3
Location (hg38): chr12:58588288-58589886
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 373 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00020447; NONHSAT029026
Alternative gene names: XLOC_009780; linc-SLC16A7-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -154.9234 non-coding 
CPAT coding probability 0.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATP23-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-XRCC6BP1-2:1
3.1 lnc-XRCC6BP1-3:1
4.0 lnc-XRCC6BP1-3:1
4.1 lnc-XRCC6BP1-3:1
5.0 lnc-XRCC6BP1-3:1
5.1 lnc-CDK2-86:1
5.2 lnc-ATP23-3:1