Transcript: lnc-ZNF678-5:1

Basic information

LNCipedia transcript ID: lnc-ZNF678-5:1 
LNCipedia gene ID: lnc-ZNF678-5
Location (hg38): chr1:227278602-227284301
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4563 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_204_chr1:227466302-227471954_brain
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 14.8959 non-coding 
CPAT coding probability 0.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF678-5:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF678-5:1
4.0 lnc-ZNF678-5:1
4.1 lnc-ZNF678-5:1
5.0 lnc-ZNF678-5:1
5.1 lnc-ZNF678-5:1
5.2 lnc-ZNF678-5:1