Transcript: lnc-ZNF704-7:3

Basic information

LNCipedia transcript ID: lnc-ZNF704-7:3 
LNCipedia gene ID: lnc-ZNF704-7
Location (hg38): chr8:80484561-80485619
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1059 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017
Alternative transcript names: ENST00000605948.1
Alternative gene names: ENSG00000251867.2; Y_RNA; ENSG00000251867.3; RP11-48B3.5; AC009812.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 9.6037 non-coding 
CPAT coding probability 0.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF704-7:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF704-7:3
4.0 lnc-ZNF704-7:3
4.1 lnc-ZNF704-7:3
5.0 lnc-ZNF704-7:3
5.1 lnc-CPA6-138:12
5.2 lnc-ZNF704-7:3