Gene: ZFAS1
Basic information
LNCipedia gene ID: ZFAS1
Location (hg38): chr20:49276739-49361131
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA_gene
Transcripts: 30
Transcripts
| Transcript ID | Location (hg38) | Length |
|---|---|---|
| ZFAS1:1 | chr20:49278178-49289260 | 946 bp |
| ZFAS1:10 | chr20:49278584-49289262 | 604 bp |
| ZFAS1:11 | chr20:49278584-49289262 | 542 bp |
| ZFAS1:12 | chr20:49278642-49289260 | 504 bp |
| ZFAS1:13 | chr20:49278642-49289260 | 566 bp |
| ZFAS1:14 | chr20:49278642-49289256 | 767 bp |
| ZFAS1:15 | chr20:49278642-49289258 | 502 bp |
| ZFAS1:16 | chr20:49278654-49295594 | 508 bp |
| ZFAS1:17 | chr20:49279174-49281181 | 732 bp |
| ZFAS1:18 | chr20:49290888-49295738 | 597 bp |
| ZFAS1:19 | chr20:49276739-49295727 | 533 bp |
| ZFAS1:2 | chr20:49278178-49289260 | 1075 bp |
| ZFAS1:20 | chr20:49276739-49295727 | 681 bp |
| ZFAS1:21 | chr20:49278642-49289260 | 396 bp |
| ZFAS1:22 | chr20:49278642-49361131 | 276 bp |
| ZFAS1:24 | chr20:49278642-49289260 | 504 bp |
| ZFAS1:25 | chr20:49278642-49289260 | 544 bp |
| ZFAS1:26 | chr20:49278642-49289260 | 566 bp |
| ZFAS1:27 | chr20:49278642-49289260 | 482 bp |
| ZFAS1:28 | chr20:49278642-49289260 | 611 bp |
| ZFAS1:29 | chr20:49280508-49287624 | 847 bp |
| ZFAS1:3 | chr20:49278178-49289260 | 860 bp |
| ZFAS1:30 | chr20:49280508-49289068 | 1003 bp |
| ZFAS1:31 | chr20:49278178-49289260 | 689 bp |
| ZFAS1:4 | chr20:49278178-49289260 | 1008 bp |
| ZFAS1:5 | chr20:49278178-49289258 | 687 bp |
| ZFAS1:6 | chr20:49278178-49289258 | 944 bp |
| ZFAS1:7 | chr20:49278178-49289258 | 858 bp |
| ZFAS1:8 | chr20:49278178-49289258 | 1006 bp |
| ZFAS1:9 | chr20:49278271-49289260 | 596 bp |
Locus conservation
Available literature
- Thorenoor (2016), Long non-coding RNA ZFAS1 interacts with CDK1 and is involved in p53-dependent cell cycle control and apoptosis in colorectal cancer., Oncotarget
- Zhang (2016), Long non-coding RNA chromogenic in situ hybridisation signal pattern correlation with breast tumour pathology., J. Clin. Pathol.
- Imam (2015), The lncRNA NRON modulates HIV-1 replication in a NFAT-dependent manner and is differentially regulated by early and late viral proteins., Sci Rep
- Na (2015), Long non-coding RNA UCA1 contributes to the progression of prostate cancer and regulates proliferation through KLF4-KRT6/13 signaling pathway., Int J Clin Exp Med
- Pei (2015), Notch-1 promotes breast cancer cells proliferation by regulating LncRNA GAS5., Int J Clin Exp Med
- Su (2014), Comprehensive analysis of long non-coding RNAs in human breast cancer clinical subtypes., Oncotarget
- Cao (2013), Analysis of long non-coding RNA expression profiles in gastric cancer., World J. Gastroenterol.
- Clark (2012), Genome-wide analysis of long noncoding RNA stability., Genome Res.
- Askarian-Amiri (2011), SNORD-host RNA Zfas1 is a regulator of mammary development and a potential marker for breast cancer., RNA
- Friedel (2009), Conserved principles of mammalian transcriptional regulation revealed by RNA half-life., Nucleic Acids Res.
- Sharova (2009), Database for mRNA half-life of 19 977 genes obtained by DNA microarray analysis of pluripotent and differentiating mouse embryonic stem cells., DNA Res.