Transcript: LINGO1-AS2:2

Basic information

LNCipedia transcript ID: LINGO1-AS2:2 
LNCipedia gene ID: LINGO1-AS2
RefSeq ID: NR_120362
Location (hg38): chr15:77660051-77668074
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 646 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_120362; NR_120362.1
Alternative gene names: ; LINGO1-AS2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -60.9604 non-coding 
CPAT coding probability 2.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINGO1-AS2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HMG20A-4:5
4.0 LINGO1-AS2:2
4.1 LINGO1-AS2:2
5.0 LINGO1-AS2:2
5.1 LINGO1-AS2:2
5.2 LINGO1-AS2:2