Transcript: ACOXL-AS1:6

Basic information

LNCipedia transcript ID: ACOXL-AS1:6 
LNCipedia gene ID: ACOXL-AS1
RefSeq ID: NR_122074
Location (hg38): chr2:111098341-111115588
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3212 bp
Exons: 4
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_122074; NR_122074.1
Alternative gene names: LOC400997


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -124.4583 non-coding 
CPAT coding probability 12.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ACOXL-AS1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC108463.1-1:3
4.0 lnc-AC108463.1-1:3
4.1 lnc-AC108463.1-1:3
5.0 lnc-AC108463.1-1:3
5.1 ACOXL-AS1:3
5.2 ACOXL-AS1:6