Transcript: ACOXL-AS1:7

Basic information

LNCipedia transcript ID: ACOXL-AS1:7 
HGNC Gene Symbol: ACOXL-AS1    
HGNC Full Gene Name: ACOXL antisense RNA 1
Ensembl Gene ID: ENSG00000204581
Ensembl Transcript ID: ENST00000376593
Location (hg38): chr2:111098345-111114185
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3026 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000376593.2; AC096670.3-002; OTTHUMT00000331945.1; NONHSAT073611
Alternative gene names: ENSG00000204581.2; AC096670.3; OTTHUMG00000153643.1; ACOXL-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -124.4583 non-coding 
CPAT coding probability 12.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ACOXL-AS1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC108463.1-1:2
4.0 lnc-AC108463.1-1:2
4.1 lnc-AC108463.1-1:2
5.0 lnc-AC108463.1-1:2
5.1 ACOXL-AS1:4
5.2 ACOXL-AS1:7