Transcript: ACTN1-AS1:1

Basic information

LNCipedia transcript ID: ACTN1-AS1:1 
HGNC Gene Symbol: ACTN1-AS1    
HGNC Full Gene Name: ACTN1 antisense RNA 1
Ensembl Gene ID: ENSG00000259062
Ensembl Transcript ID: ENST00000553961
RefSeq ID: NR_073422
Location (hg38): chr14:68979682-68987463
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 599 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000553961.1; ACTN1-AS1-002; OTTHUMT00000414804.1; NONHSAT037504; NR_073422; NR_073422.1
Alternative gene names: ENSG00000259062.1; ACTN1-AS1; OTTHUMG00000171698.1; ENSG00000259062.2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ACTN1-AS1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-EXD2-1:1
4.0 ACTN1-AS1:1
4.1 ACTN1-AS1:1
5.0 ACTN1-AS1:1
5.1 ACTN1-AS1:1
5.2 ACTN1-AS1:1