Transcript: ADAMTS19-AS1:2

Basic information

LNCipedia transcript ID: ADAMTS19-AS1:2 
HGNC Gene Symbol: ADAMTS19-AS1    
HGNC Full Gene Name: ADAMTS19 antisense RNA 1
Ensembl Gene ID: ENSG00000249421
Ensembl Transcript ID: ENST00000502827
RefSeq ID: NR_125748
Location (hg38): chr5:129459559-129460689
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 786 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000502827.1; RP11-346A9.1-001; OTTHUMT00000371449.1; NONHSAT103669; NR_125748; NR_125748.1
Alternative gene names: ENSG00000249421.1; RP11-346A9.1; OTTHUMG00000163040.1; ADAMTS19-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -186.7316 non-coding 
CPAT coding probability 1.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ADAMTS19-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FBN2-5:1
4.0 ADAMTS19-AS1:2
4.1 ADAMTS19-AS1:2
5.0 ADAMTS19-AS1:2
5.1 ADAMTS19-AS1:2
5.2 ADAMTS19-AS1:2