Transcript: ADAMTS9-AS1:31

Basic information

LNCipedia transcript ID: ADAMTS9-AS1:31 
HGNC Gene Symbol: ADAMTS9-AS1    
HGNC Full Gene Name: ADAMTS9 antisense RNA 1
Ensembl Gene ID: ENSG00000241158
Ensembl Transcript ID: ENST00000630336
Location (hg38): chr3:64583151-64592404
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 827 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000630336.2
Alternative gene names: ENSG00000241158.5; ADAMTS9-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -197.7511 non-coding 
CPAT coding probability 0.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ADAMTS9-AS1:31 yes no no no

Available literature

  1. Wang (2016), LncRNAs expression profiling in normal ovary, benign ovarian cyst and malignant epithelial ovarian cancer., Sci Rep


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 ADAMTS9-AS1:31
4.1 ADAMTS9-AS1:31
5.0 ADAMTS9-AS1:31
5.1 ADAMTS9-AS1:31
5.2 ADAMTS9-AS1:31