Transcript: ADAMTSL4-AS1:1

Basic information

LNCipedia transcript ID: ADAMTSL4-AS1:1 
HGNC Gene Symbol: ADAMTSL4-AS1    
HGNC Full Gene Name: ADAMTSL4 antisense RNA 1
Ensembl Gene ID: ENSG00000203804
Ensembl Transcript ID: ENST00000617352
RefSeq ID: NR_104133
Location (hg38): chr1:150560895-150574552
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1036 bp
Exons: 4
Sources: Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_104133; ENST00000617352.1; NR_104133.1
Alternative gene names: ENSG00000203804.4; ADAMTSL4-AS1; FLJ45786


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -27.0448 non-coding 
CPAT coding probability 7.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ADAMTSL4-AS1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C1orf138-3:1
4.0 ADAMTSL4-AS1:1
4.1 ADAMTSL4-AS1:1
5.0 ADAMTSL4-AS1:1
5.1 ADAMTSL4-AS1:1
5.2 ADAMTSL4-AS1:1