Transcript: ADARB2-AS1:2

Basic information

LNCipedia transcript ID: ADARB2-AS1:2 
HGNC Gene Symbol: ADARB2-AS1    
HGNC Full Gene Name: ADARB2 antisense RNA 1
Ensembl Gene ID: ENSG00000205696
Ensembl Transcript ID: ENST00000421697
Location (hg38): chr10:1526637-1556984
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 637 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000421697.2; ADARB2-AS1-002; OTTHUMT00000046425.1
Alternative gene names: ENSG00000205696.4; ADARB2-AS1; OTTHUMG00000017542.2; bA466B20.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 20.6143 non-coding 
CPAT coding probability 62.30% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
ADARB2-AS1:2 yes no no no

Available literature

  1. Permuth (2017), Linc-ing Circulating Long Non-coding RNAs to the Diagnosis and Malignant Prediction of Intraductal Papillary Mucinous Neoplasms of the Pancreas., Sci Rep


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-WDR37-2:1
4.0 ADARB2-AS1:2
4.1 ADARB2-AS1:2
5.0 ADARB2-AS1:2
5.1 ADARB2-AS1:2
5.2 ADARB2-AS1:2