Transcript: ADGRD1-AS1:3

Basic information

LNCipedia transcript ID: ADGRD1-AS1:3 
LNCipedia gene ID: ADGRD1-AS1
RefSeq ID: NR_131950
Location (hg38): chr12:130990626-130993976
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 789 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_131950.1
Alternative gene names: LACAT8


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -153.2508 non-coding 
CPAT coding probability 1.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ADGRD1-AS1:3 yes no no no

Available literature

  1. Iyer (2015), The landscape of long noncoding RNAs in the human transcriptome., Nat. Genet.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 ADGRD1-AS1:3
5.1 ADGRD1-AS1:3
5.2 ADGRD1-AS1:3