Transcript: ADGRL3-AS1:2

Basic information

LNCipedia transcript ID: ADGRL3-AS1:2 
HGNC Gene Symbol: ADGRL3-AS1    
HGNC Full Gene Name: adhesion G protein-coupled receptor L3 antisense RNA 1
Ensembl Gene ID: ENSG00000248692
Ensembl Transcript ID: ENST00000509461
Location (hg38): chr4:62072847-62165554
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 481 bp
Exons: 8
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000509461.1; RP11-84A1.3-004; OTTHUMT00000361785.1; NONHSAT096617; ENST00000509461.5
Alternative gene names: ENSG00000248692.1; RP11-84A1.3; OTTHUMG00000160691.1; ENSG00000248692.5; ADGRL3-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.214 non-coding 
CPAT coding probability 11.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ADGRL3-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TECRL-4:1
4.0 ADGRL3-AS1:2
4.1 ADGRL3-AS1:2
5.0 ADGRL3-AS1:2
5.1 ADGRL3-AS1:2
5.2 ADGRL3-AS1:2