Transcript: ADIPOQ-AS1:2

Basic information

LNCipedia transcript ID: ADIPOQ-AS1:2 
HGNC Gene Symbol: ADIPOQ-AS1    
HGNC Full Gene Name: ADIPOQ antisense RNA 1
Ensembl Gene ID: ENSG00000226482
Ensembl Transcript ID: ENST00000422718
RefSeq ID: NR_046662
Location (hg38): chr3:186851886-186856123
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3443 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000422718.1; ADIPOQ-AS1-001; OTTHUMT00000344470.1; NONHSAT093871; NR_046662.1
Alternative gene names: ENSG00000226482.1; ADIPOQ-AS1; OTTHUMG00000156514.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 9.49 non-coding 
CPAT coding probability 71.96% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
ADIPOQ-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RFC4-3:1
4.0 ADIPOQ-AS1:2
4.1 ADIPOQ-AS1:2
5.0 ADIPOQ-AS1:2
5.1 ADIPOQ-AS1:2
5.2 ADIPOQ-AS1:2