Transcript: ADIRF-AS1:3

Basic information

LNCipedia transcript ID: ADIRF-AS1:3 
LNCipedia gene ID: ADIRF-AS1
Ensembl Gene ID: ENSG00000273413
Ensembl Transcript ID: ENST00000609363
Location (hg38): chr10:86970237-86970826
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 465 bp
Exons: 2
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000609363.1
Alternative gene names: ENSG00000273413.1; RP11-96C23.15; ; AL136982.7


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -124.1101 non-coding 
CPAT coding probability 19.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ADIRF-AS1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GLUD1-3:5
4.0 ADIRF-AS1:3
4.1 ADIRF-AS1:3
5.0 ADIRF-AS1:3
5.1 ADIRF-AS1:3
5.2 ADIRF-AS1:3