Transcript: ADPGK-AS1:6

Basic information

LNCipedia transcript ID: ADPGK-AS1:6 
LNCipedia gene ID: ADPGK-AS1
Location (hg38): chr15:72785521-72792897
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 684 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT047127
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -4.2276 non-coding 
CPAT coding probability 11.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ADPGK-AS1:6 yes no no no

Available literature

  1. Song (2018), LncRNA ADPGK-AS1 promotes pancreatic cancer progression through activating ZEB1-mediated epithelial-mesenchymal transition., Cancer Biol. Ther.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-BBS4-1:6
4.0 ADPGK-AS1:6
4.1 ADPGK-AS1:6
5.0 ADPGK-AS1:6
5.1 ADPGK-AS1:6
5.2 ADPGK-AS1:6