Transcript: AFF1-AS1:3

Basic information

LNCipedia transcript ID: AFF1-AS1:3 
LNCipedia gene ID: AFF1-AS1
Ensembl Gene ID: ENSG00000284968
Ensembl Transcript ID: ENST00000508280
Location (hg38): chr4:86924630-86936202
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2158 bp
Exons: 4
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000508280.6
Alternative gene names: ENSG00000284968.1; AC093827.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 5.6416 non-coding 
CPAT coding probability 0.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
AFF1-AS1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 AFF1-AS1:3
5.1 AFF1-AS1:3
5.2 AFF1-AS1:3