Transcript: AGBL1-AS1:7

Basic information

LNCipedia transcript ID: AGBL1-AS1:7 
HGNC Gene Symbol: AGBL1-AS1    
HGNC Full Gene Name: AGBL1 antisense RNA 1
Ensembl Gene ID: ENSG00000260125
Ensembl Transcript ID: ENST00000564487
Location (hg38): chr15:86295649-86304981
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1642 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000564487.1; RP11-31E22.1-003; OTTHUMT00000420989.1; NONHSAT048132
Alternative gene names: ENSG00000260125.1; RP11-31E22.1; OTTHUMG00000172872.1; AGBL1-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -103.0284 non-coding 
CPAT coding probability 0.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
AGBL1-AS1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KLHL25-10:3
4.0 AGBL1-AS1:7
4.1 AGBL1-AS1:7
5.0 AGBL1-AS1:7
5.1 AGBL1-AS1:7
5.2 AGBL1-AS1:7