Transcript: AGBL5-AS1:1

Basic information

LNCipedia transcript ID: AGBL5-AS1:1 
HGNC Gene Symbol: AGBL5-AS1    
HGNC Full Gene Name: AGBL5 antisense RNA 1
Ensembl Gene ID: ENSG00000231636
Ensembl Transcript ID: ENST00000444217
RefSeq ID: NR_046730
Location (hg38): chr2:27049683-27050264
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 407 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000444217.1; AGBL5-AS1-001; OTTHUMT00000324732.1; NONHSAT069718; NR_046730.1
Alternative gene names: ENSG00000231636.1; AGBL5-AS1; OTTHUMG00000151996.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -249.9578 non-coding 
CPAT coding probability 0.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
AGBL5-AS1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-OST4-1:1
4.0 AGBL5-AS1:1
4.1 AGBL5-AS1:1
5.0 AGBL5-AS1:1
5.1 AGBL5-AS1:1
5.2 AGBL5-AS1:1