Transcript: AIRN:2
Basic information
LNCipedia transcript ID: AIRN:2
HGNC Gene Symbol: AIRN
HGNC Full Gene Name:
antisense of IGF2R non-protein coding RNA
Ensembl Gene ID:
ENSG00000268257
Ensembl Transcript ID:
ENST00000601203
RefSeq ID:
NR_047514
Location (hg38): chr6:160003291-160007664
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4374 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT115888; NR_047514; ENST00000601203.1; NR_047514.1
Alternative gene names: ENSG00000268257.2; AIRN; AIR; NCRNA00088; IGF2RAS; IGF2R-AS1
RNA sequence:
Structure:
Protein coding potential
In stringent set: no
Locus conservation
Available literature
- Kanduri (2016), Long noncoding RNAs: Lessons from genomic imprinting., Biochim. Biophys. Acta
- He (2015), LongTarget: a tool to predict lncRNA DNA-binding motifs and binding sites via Hoogsteen base-pairing analysis., Bioinformatics
- Smolle (2015), Long Non-Coding RNAs in Endometrial Carcinoma., Int J Mol Sci
- Roberts (2014), The role of long non-coding RNAs in neurodevelopment, brain function and neurological disease., Philos. Trans. R. Soc. Lond., B, Biol. Sci.
- Sun (2014), A novel antisense long noncoding RNA within the IGF1R gene locus is imprinted in hematopoietic malignancies., Nucleic Acids Res.
- Beato (2013), A new role for an old player: steroid receptor RNA Activator (SRA) represses hormone inducible genes., Transcription
- Kobayashi (2013), Epigenetic and transcriptional features of the novel human imprinted lncRNA GPR1AS suggest it is a functional ortholog to mouse Zdbf2linc., Epigenetics
- Niemczyk (2013), Imprinted chromatin around DIRAS3 regulates alternative splicing of GNG12-AS1, a long noncoding RNA., Am. J. Hum. Genet.
- Papait (2013), Long noncoding RNA: a new player of heart failure?, J Cardiovasc Transl Res
- Santoro (2013), Silencing by the imprinted Airn macro lncRNA: transcription is the answer., Cell Cycle
- Latos (2012), Airn transcriptional overlap, but not its lncRNA products, induces imprinted Igf2r silencing., Science
- Tilgner (2012), Deep sequencing of subcellular RNA fractions shows splicing to be predominantly co-transcriptional in the human genome but inefficient for lncRNAs., Genome Res.
- Troy (2012), Genetic "lnc"-age of noncoding RNAs to human disease., J. Clin. Invest.
- Saxena (2011), Long non-coding RNA modifies chromatin: epigenetic silencing by long non-coding RNAs., Bioessays
- Stricker (2008), Silencing and transcriptional properties of the imprinted Airn ncRNA are independent of the endogenous promoter., EMBO J.
- Yotova (2008), Identification of the human homolog of the imprinted mouse Air non-coding RNA., Genomics
LNCipedia transcript ID history
LNCipedia version | LNCipedia transcript ID |
---|---|
3.1 | lnc-SLC22A2-4:1 |
4.0 | AIRN:2 |
4.1 | AIRN:2 |
5.0 | AIRN:2 |
5.1 | AIRN:2 |
5.2 | AIRN:2 |