Transcript: AKT3-IT1:1

Basic information

LNCipedia transcript ID: AKT3-IT1:1 
HGNC Gene Symbol: AKT3-IT1    
HGNC Full Gene Name: AKT3 intronic transcript 1
Ensembl Gene ID: ENSG00000228939
Ensembl Transcript ID: ENST00000417120
Location (hg38): chr1:243793205-243794400
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 517 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000417120.1; AKT3-IT1-001; OTTHUMT00000096478.1; NONHSAT010627
Alternative gene names: ENSG00000228939.1; AKT3-IT1; OTTHUMG00000039993.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -32.3385 non-coding 
CPAT coding probability 1.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
AKT3-IT1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CEP170-5:1
4.0 AKT3-IT1:1
4.1 AKT3-IT1:1
5.0 AKT3-IT1:1
5.1 AKT3-IT1:1
5.2 AKT3-IT1:1