Transcript: ALKBH3-AS1:2

Basic information

LNCipedia transcript ID: ALKBH3-AS1:2 
LNCipedia gene ID: ALKBH3-AS1
RefSeq ID: NR_038907
Location (hg38): chr11:43909289-43920944
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1927 bp
Exons: 6
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT018963; NR_038907; NR_038907.1
Alternative gene names: ; ALKBH3-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -94.7845 non-coding 
CPAT coding probability 0.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ALKBH3-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ALX4-4:5
4.0 ALKBH3-AS1:2
4.1 ALKBH3-AS1:2
5.0 ALKBH3-AS1:2
5.1 ALKBH3-AS1:2
5.2 ALKBH3-AS1:2