Transcript: ALKBH3-AS1:3

Basic information

LNCipedia transcript ID: ALKBH3-AS1:3 
HGNC Gene Symbol: ALKBH3-AS1    
HGNC Full Gene Name: ALKBH3 antisense RNA 1
Ensembl Gene ID: ENSG00000244926
Ensembl Transcript ID: ENST00000499194
Location (hg38): chr11:43909292-43920926
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1906 bp
Exons: 6
Sources: Biogazelle lncRNA chip; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000499194; ENST00000499194.1; RP11-613D13.7-001; OTTHUMT00000390392.1; ENST00000499194.5
Alternative gene names: ENSG00000244926; ENSG00000244926.2; RP11-613D13.7; OTTHUMG00000166553.1; ALKBH3-AS1; ENSG00000244926.6;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -94.7845 non-coding 
CPAT coding probability 0.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ALKBH3-AS1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ALX4-4:2
3.1 lnc-ALX4-4:2
4.0 ALKBH3-AS1:3
4.1 ALKBH3-AS1:3
5.0 ALKBH3-AS1:3
5.1 ALKBH3-AS1:3
5.2 ALKBH3-AS1:3