Transcript: ALMS1-IT1:3

Basic information

LNCipedia transcript ID: ALMS1-IT1:3 
LNCipedia gene ID: ALMS1-IT1
Location (hg38): chr2:73457103-73459477
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1761 bp
Exons: 2
Sources: Refseq - Dec 2014
Alternative transcript names: NR_046762
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -10.0962 non-coding 
CPAT coding probability 0.88% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ALMS1-IT1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CCT7-2:3
4.0 ALMS1-IT1:3
4.1 ALMS1-IT1:3
5.0 ALMS1-IT1:3
5.1 ALMS1-IT1:3
5.2 ALMS1-IT1:3