Transcript: ANKRD34C-AS1:5

Basic information

LNCipedia transcript ID: ANKRD34C-AS1:5 
HGNC Gene Symbol: ANKRD34C-AS1    
HGNC Full Gene Name: ANKRD34C antisense RNA 1
Ensembl Gene ID: ENSG00000259234
Ensembl Transcript ID: ENST00000560533
Location (hg38): chr15:79213097-79283855
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 612 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000560533.1; RP11-17L5.4-007; OTTHUMT00000417804.1; NONHSAT047645; ENST00000560533.5
Alternative gene names: ENSG00000259234.1; RP11-17L5.4; OTTHUMG00000172071.2; ENSG00000259234.5; ANKRD34C-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -177.2126 non-coding 
CPAT coding probability 25.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ANKRD34C-AS1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RASGRF1-1:4
4.0 ANKRD34C-AS1:5
4.1 ANKRD34C-AS1:5
5.0 ANKRD34C-AS1:5
5.1 ANKRD34C-AS1:5
5.2 ANKRD34C-AS1:5