Transcript: ANKRD44-IT1:1

Basic information

LNCipedia transcript ID: ANKRD44-IT1:1 
HGNC Gene Symbol: ANKRD44-IT1    
HGNC Full Gene Name: ANKRD44 intronic transcript 1
Ensembl Gene ID: ENSG00000236977
Ensembl Transcript ID: ENST00000428191
RefSeq ID: NR_046837
Location (hg38): chr2:197250858-197302519
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1069 bp
Exons: 6
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000428191.1; ANKRD44-IT1-001; OTTHUMT00000335103.1; NONHSAT076212; NR_046837; NR_046837.1
Alternative gene names: ENSG00000236977.1; ANKRD44-IT1; OTTHUMG00000154409.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -10.8082 non-coding 
CPAT coding probability 0.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ANKRD44-IT1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SF3B1-1:1
4.0 ANKRD44-IT1:1
4.1 ANKRD44-IT1:1
5.0 ANKRD44-IT1:1
5.1 ANKRD44-IT1:1
5.2 ANKRD44-IT1:1