Transcript: APCDD1L-DT:25

Basic information

LNCipedia transcript ID: APCDD1L-DT:25 
LNCipedia gene ID: APCDD1L-DT
Location (hg38): chr20:58514895-58528196
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 8712 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT080546
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1.3942 non-coding 
CPAT coding probability 5.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
APCDD1L-DT:25 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-VAPB-1:9
4.0 APCDD1L-AS1:1
4.1 APCDD1L-AS1:1
5.0 APCDD1L-AS1:1
5.1 APCDD1L-DT:2
5.2 APCDD1L-DT:25