Transcript: APCDD1L-DT:38

Basic information

LNCipedia transcript ID: APCDD1L-DT:38 
LNCipedia gene ID: APCDD1L-DT
Location (hg38): chr20:58515499-58547822
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 555 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000231290.1|ENST00000420279.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -147.4111 non-coding 
CPAT coding probability 2.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
APCDD1L-DT:38 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 APCDD1L-AS1:20
5.0 APCDD1L-AS1:20
5.1 APCDD1L-DT:15
5.2 APCDD1L-DT:38