Transcript: APOBEC3B-AS1:1

Basic information

LNCipedia transcript ID: APOBEC3B-AS1:1 
LNCipedia gene ID: APOBEC3B-AS1
RefSeq ID: NR_104187
Location (hg38): chr22:38991559-38998220
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 702 bp
Exons: 5
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_104187; NR_104187.1
Alternative gene names: ; APOBEC3B-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 9.5477 non-coding 
CPAT coding probability 13.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
APOBEC3B-AS1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CBX6-1:2
4.0 APOBEC3B-AS1:1
4.1 APOBEC3B-AS1:1
5.0 APOBEC3B-AS1:1
5.1 APOBEC3B-AS1:1
5.2 APOBEC3B-AS1:1