Transcript: AQP4-AS1:12

Basic information

LNCipedia transcript ID: AQP4-AS1:12 
LNCipedia gene ID: AQP4-AS1
Location (hg38): chr18:26655742-26660907
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 427 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000260372.2|FTMT27100015467.1
Alternative gene names: FLJ30507


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -307.0831 non-coding 
CPAT coding probability 0.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
AQP4-AS1:12 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 AQP4-AS1:12
5.0 AQP4-AS1:12
5.1 AQP4-AS1:12
5.2 AQP4-AS1:12