Transcript: AQP4-AS1:18

Basic information

LNCipedia transcript ID: AQP4-AS1:18 
LNCipedia gene ID: AQP4-AS1
Location (hg38): chr18:26865308-27190698
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2176 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000260372.2|ENST00000578701.1
Alternative gene names: FLJ30507


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -216.6653 non-coding 
CPAT coding probability 1.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
AQP4-AS1:18 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 AQP4-AS1:18
5.0 AQP4-AS1:18
5.1 AQP4-AS1:18
5.2 AQP4-AS1:18