Transcript: AQP4-AS1:3

Basic information

LNCipedia transcript ID: AQP4-AS1:3 
HGNC Gene Symbol: AQP4-AS1    
HGNC Full Gene Name: AQP4 antisense RNA 1
Ensembl Gene ID: ENSG00000260372
Ensembl Transcript ID: ENST00000628174
Location (hg38): chr18:26703086-26925827
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 919 bp
Exons: 4
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000628174.2
Alternative gene names: ENSG00000260372.6; AQP4-AS1; FLJ30507


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -119.8744 non-coding 
CPAT coding probability 1.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
AQP4-AS1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 AQP4-AS1:3
4.1 AQP4-AS1:3
5.0 AQP4-AS1:3
5.1 AQP4-AS1:3
5.2 AQP4-AS1:3