Transcript: ARF4-AS1:4

Basic information

LNCipedia transcript ID: ARF4-AS1:4 
HGNC Gene Symbol: ARF4-AS1    
HGNC Full Gene Name: ARF4 antisense RNA 1
Ensembl Gene ID: ENSG00000272146
Ensembl Transcript ID: ENST00000607782
Location (hg38): chr3:57597796-57600927
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 552 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000607782.1
Alternative gene names: ENSG00000272146.1; RP11-755B10.4; ENSG00000272146.5; ARF4-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 5.184 non-coding 
CPAT coding probability 3.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ARF4-AS1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PDE12-2:4
4.0 ARF4-AS1:4
4.1 ARF4-AS1:4
5.0 ARF4-AS1:4
5.1 ARF4-AS1:4
5.2 ARF4-AS1:4