Transcript: ARHGAP26-AS1:2

Basic information

LNCipedia transcript ID: ARHGAP26-AS1:2 
HGNC Gene Symbol: ARHGAP26-AS1    
HGNC Full Gene Name: ARHGAP26 antisense RNA 1
Ensembl Gene ID: ENSG00000226272
Ensembl Transcript ID: ENST00000434610
Location (hg38): chr5:142859604-142868922
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 731 bp
Exons: 5
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000434610.1; ARHGAP26-AS1-003; OTTHUMT00000206844.1; NONHSAT104332
Alternative gene names: ENSG00000226272.1; ARHGAP26-AS1; OTTHUMG00000059702.2; ENSG00000226272.5;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -143.489 non-coding 
CPAT coding probability 11.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ARHGAP26-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FGF1-1:1
4.0 ARHGAP26-AS1:2
4.1 ARHGAP26-AS1:2
5.0 ARHGAP26-AS1:2
5.1 ARHGAP26-AS1:2
5.2 ARHGAP26-AS1:2