Transcript: ARHGAP5-AS1:4

Basic information

LNCipedia transcript ID: ARHGAP5-AS1:4 
HGNC Gene Symbol: ARHGAP5-AS1    
HGNC Full Gene Name: ARHGAP5 antisense RNA 1 (head to head)
Ensembl Gene ID: ENSG00000258655
Ensembl Transcript ID: ENST00000553596
Location (hg38): chr14:32074946-32076793
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1848 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000553596.2
Alternative gene names: ENSG00000258655.2; ARHGAP5-AS1; MGC15504


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -122.8755 non-coding 
CPAT coding probability 9.88% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ARHGAP5-AS1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 ARHGAP5-AS1:4
4.1 ARHGAP5-AS1:4
5.0 ARHGAP5-AS1:4
5.1 ARHGAP5-AS1:4
5.2 ARHGAP5-AS1:4