Transcript: ARHGEF26-AS1:3

Basic information

LNCipedia transcript ID: ARHGEF26-AS1:3 
HGNC Gene Symbol: ARHGEF26-AS1    
HGNC Full Gene Name: ARHGEF26 antisense RNA 1
Ensembl Gene ID: ENSG00000243069
Ensembl Transcript ID: ENST00000480639
Location (hg38): chr3:154026479-154121263
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 582 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000480639.1; ARHGEF26-AS1-002; OTTHUMT00000356689.1; NONHSAT092798; ENST00000480639.5
Alternative gene names: ENSG00000243069.1; ARHGEF26-AS1; OTTHUMG00000159647.1; ENSG00000243069.3; ENSG00000243069.7;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -15.5368 non-coding 
CPAT coding probability 0.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ARHGEF26-AS1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DHX36-1:3
4.0 ARHGEF26-AS1:3
4.1 ARHGEF26-AS1:3
5.0 ARHGEF26-AS1:3
5.1 ARHGEF26-AS1:3
5.2 ARHGEF26-AS1:3