Transcript: ARHGEF7-AS1:4

Basic information

LNCipedia transcript ID: ARHGEF7-AS1:4 
LNCipedia gene ID: ARHGEF7-AS1
RefSeq ID: NR_046516
Location (hg38): chr13:111144305-111148565
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 419 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_046516; NR_046516.1
Alternative gene names: ; ARHGEF7-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -116.6621 non-coding 
CPAT coding probability 2.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ARHGEF7-AS1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANKRD10-3:5
4.0 ARHGEF7-AS1:4
4.1 ARHGEF7-AS1:4
5.0 ARHGEF7-AS1:4
5.1 ARHGEF7-AS1:4
5.2 ARHGEF7-AS1:4