Transcript: ARRDC3-AS1:1

Basic information

LNCipedia transcript ID: ARRDC3-AS1:1 
LNCipedia gene ID: ARRDC3-AS1
RefSeq ID: NR_027435
Location (hg38): chr5:91380347-91420715
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2502 bp
Exons: 3
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT102762; NR_027435; NR_027435.1
Alternative gene names: ; ARRDC3-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 0.2593 non-coding 
CPAT coding probability 16.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ARRDC3-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GPR98-10:1
4.0 ARRDC3-AS1:1
4.1 ARRDC3-AS1:1
5.0 ARRDC3-AS1:1
5.1 ARRDC3-AS1:1
5.2 ARRDC3-AS1:1