Transcript: ARRDC3-AS1:4

Basic information

LNCipedia transcript ID: ARRDC3-AS1:4 
HGNC Gene Symbol: ARRDC3-AS1    
HGNC Full Gene Name: ARRDC3 antisense RNA 1
Ensembl Gene ID: ENSG00000281357
Ensembl Transcript ID: ENST00000630823
Location (hg38): chr5:91380397-91439085
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 737 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000630823.2
Alternative gene names: ENSG00000281357.2; ARRDC3-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -132.9302 non-coding 
CPAT coding probability 10.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ARRDC3-AS1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 ARRDC3-AS1:4
4.1 ARRDC3-AS1:4
5.0 ARRDC3-AS1:4
5.1 ARRDC3-AS1:4
5.2 ARRDC3-AS1:4