Transcript: ASB16-AS1:16

Basic information

LNCipedia transcript ID: ASB16-AS1:16 
LNCipedia gene ID: ASB16-AS1
RefSeq ID: NR_049730
Location (hg38): chr17:44175973-44186717
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 921 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_049730.1
Alternative gene names: ASB16-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -494.779 non-coding 
CPAT coding probability 1.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ASB16-AS1:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 ASB16-AS1:16
5.1 ASB16-AS1:16
5.2 ASB16-AS1:16