Transcript: ASB16-AS1:2

Basic information

LNCipedia transcript ID: ASB16-AS1:2 
LNCipedia gene ID: ASB16-AS1
Location (hg38): chr17:44175974-44186717
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 920 bp
Exons: 3
Sources: NONCODE v4; Refseq - Dec 2014
Alternative transcript names: NONHSAT053906; NR_049730
Alternative gene names: DKFZp762C2414


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -494.779 non-coding 
CPAT coding probability 2.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ASB16-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C17orf65-2:2
4.0 ASB16-AS1:2
4.1 ASB16-AS1:2
5.0 ASB16-AS1:2
5.1 ASB16-AS1:2
5.2 ASB16-AS1:2